It does it with cobb ots also. I just got -1.50 fromt wot. Didnt pay attention to what gear or rpm tho.
Anytime you're logging for comparison purposes, try to null out as many variables as possible. Use the same road, same gear, start from roughly the same rpm, etc. The more variables you can minimize, the more likely the problem can be isolated and solved. Make sure you've stabilized your car at operating temperatures for a few minutes before you start.
My FoST would regularly log negative corrections on the OTS tune, but those platforms have ridiculously sensitive knock sensors so it's not exactly apples-apples.
If you're getting that much correction that often, the first two things I would personally check into is the fuel and spark plug gap-especially if you weren't having the problem previously on the custom tune. Maybe you had a bad tank of gas, maybe you've put a lot of miles on your car since it was tuned, maybe you only recently started paying attention to ign corrections.
It could be a sudden change in excessive blow-by, and that could be what's affecting your overall octane. While that's a separate problem, a catch-can can help that in the fact that it can assist in restoring the octane that your engine 'sees'. It's literally the only reason I ever recommend a catch-can. With that being said, if you're custom tuned then you shouldn't be having to worry about restoring your octane because you would already be tuned based on what your engine sees.