I agree with
@the duke: the area in front of the windshield is high pressure. The big $$$ rally guys figured out that the best place for vents is the upper corners of the hood. I haven't tuff-ed the car but I can feel plenty of heat venting out of the Verus vents in my hood. My splitter doesn't go as far back as yours and I'm not letting as much air into the front of the car. For kicks, I might have, allegedly, headed to my favorite empty stretch of highway where I could hit > 120 and I don't have the problems that you do with the rear of my FiST and I haven't opened up the rear grid (yet).
I'll bet you a case of our respective favorite that your rear aero problem will get much better if you pull the bumper cover, tape up all the gaps around the heat-exchangers to make sure that all the air that gets in passes through a heat exchanger, tape up the bottom half of the grill, returning it to stock-ish, and add hood vents, all without reducing heat-exchanger performance.
If you flat-bottom the car the rear aero problem will get much worse. Flat-bottom cars duct the air that enters the front of the air out with hood and vender vents. Only the air that makes it under the splitter charges the diffuser.